Confocal Microscopy Literature References
The past several decades have witnessed a tremendous growth in the popularity of confocal microscopy techniques. Advances have been driven primarily due to the relative ease at which extremely high-quality images can be obtained from fixed and living specimens. Confocal microscopy offers several advantages over conventional widefield optical microscopy, including better imaging through rejection of information obtained from regions removed from the focal plane, the ability to collect serial optical sections from thick specimens, and the ability to regulate the depth of field. The key to confocal microscopy is the use of spatial filtering to eliminate out-of-focus light from specimens that are thicker than the focal plane.
Recommended Literature
- Conchello, J. A. and Lichtman, J. W. Optical sectioning microscopy. Nature Methods 2: 920-931 (2005).
- Murray, J. M., Appleton, P. L., Swedlow, J. R. and Waters, J. C. Evaluating performance in three dimensional fluorescence microscopy. Journal of Microscopy 228: 390-405 (2007).
- Swedlow, J. R., Hu, K., Andrews, P. D., Roos, D. S. and Murray J. M. Measuring tubulin content in Toxoplasma gondii: a comparison of laser-scanning confocal and wide-field fluorescence microscopy. Proceedings of the National Academy of Sciences 99: 2014-2019 (2002).
- Wang, E., Babbey, C. M. and Dunn, K. W. Performance comparison between the high-speed Yokogawa spinning disc confocal system and single-point scanning confocal systems.Journal of Microscopy 218: 148-159 (2005).
- Amos, W. B. and White, J. G. How the confocal laser scanning microscope entered biological research. Biology of the Cell 95: 335-342 (2003).
- Cox, G. Biological confocal microscopy. Materials Today 5: 34-41 (2002).
- Foldes-Papp, Z., Demel, U. and Tilz, G. P. Laser scanning confocal fluorescence microscopy: an overview. International Immunopharmacology 3: 1715-1729 (2003).
- Kozubek, M. Theoretical versus experimental resolution in optical microscopy. Microscopy Research and Technique 53: 157-166 (2001).
- Paddock, S. W. Principles and practices of laser scanning confocal microscopy. Molecular Biotechnology 16: 127-149 (2000).
- Paddock, S. W. Over the rainbow: 25 years of confocal imaging. BioTechniques 44: 643-648 (2008).
- Smith, C. L. Basic Confocal microscopy. Current Protocols in Molecular Biology 14-11: 1-18 (2008).
- Webb, R. H. Confocal optical microscopy. Reports on Progress in Physics 59: 427-471 (1996).
Additional Literature Sources
- Barbe, L., Lundberg, E., Oksvold, P., Stenius, A., Lewin, E., Bjorling, E., Asplund, A., Ponten, F., Brismar, H., Uhlen, M. and Andersson-Svahn, H. Toward a confocal subcellular atlas of the human proteome. Molecular and Cellular Proteomics 7: 499-508 (2008).
- Booth, M. J., Neil, M. A. A., Juskaitis, R. and Wilson, T. Adaptive aberration correction in a confocal microscope. Proceedings of the National Academy of Sciences (USA) 99: 5788-5792 (2002).
- Centonze, V. E. and White, J. G. Multiphoton excitation provides optical sections from deeper within scattering specimens than confocal imaging. Biophysical Journal 75: 2015-2024 (1998).
- Diaspro, A., Annunziata, S., Raimondo, M. and Robello, M. Three-dimensional optical behaviour of a confocal microscope with single illumination and detection pinhole through imaging of subresolution beads. Microscopy Research and Technique 45: 130-131 (1999).
- Diaspro, A., Corosu, M., Ramoino, P. and Robello, M. Adapting a compact confocal microscope system to a two-photon excitation fluorescence imaging architecture.Microscopy Research and Technique 47: 196-205 (1999).
- Digman, M. A., Dalal, R., Horwitz, A. F. and Gratton, E. Mapping the number of molecules and brightness in the laser scanning microscope. Biophysical Journal 94: 2320-2332 (2008).
- Dusch, E., Dorval, T., Vincent, N., Wachsmuth, M. and Genovesio, A. Three-dimensional point spread function model for line-scanning confocal microscope with high-aperture objective. Journal of Microscopy 228: 132-138 (2007).
- Evanko, D. Motionless fast 3D scanning. Nature Methods 5: 464-465 (2008).
- Fink, C., Morgan, F. and Loew, L.M. Intracellular fluorescent probe concentrations by confocal microscopy. Biophysical Journal 75: 1648-1658 (1998).
- Frank, J. H., Elder, A. D., Swartling, J., Venkitaraman, A. R., Jeyasekharan, A. D. and Kaminski, C. F. A white light confocal microscope for spectrally resolved multidimensional imaging.Journal of Microscopy 227: 203-215 (2007).
- Fujita, K., Kobayashi, M., Kawano, S., Yamanaka, M. and Kawata, S. High-resolution confocal microscopy by saturated excitation of fluorescence. Physical Review Letters 99: 1-4 (2007).
- Gauderon, R., Lukins, P. B. and Sheppard, C. J. R. Effect of a confocal pinhole in two-photon microscopy. Microscopy Research and Technique 47: 210-214 (1999).
- Gopinath, S., Wen, Q., Thakoor, N., Luby-Phelps, K. and Gao, J. X. A statistical approach for intensity loss compensation of confocal microscopy images. Journal of Microscopy 230:143-159 (2007).
- Halbhuber, K. J. and Konig, K. Modern laser scanning microscopy in biology, biotechnology and medicine. Annals of Anatomy 185: 1-20 (2003).
- Hepler, P. K. and Gunning, B. E. S. Confocal fluorescence microscopy of plant cells.Protoplasma 201: 121-157 (1998).
- Itzkan, I., Qiu, L., Fang, H., Zaman, M. M., Vitkin, E., Ghlran, J. C., Salahuddin, S., Modell, M., Andersson, C., Kimerer, L. M. Cipolloni, P. B., Lim, K. H., Freedman, S. D., Biglo, I., Sachs, B. P., Hanlon, E. B. and Perelman, L. T. Confocal light absorption and scattering spectroscopic microscopy monitors organelles in live cells with no exogenous labels.Proceedings of the National Academy of Sciences (USA) 104: 17255-17260(2007).
- Kozubek, M., Matula, P., Matula, P. and Kozubek, S. Automated acquisition and processing of multidimensional image data in confocal in vivo microscopy. Microscopy Research and Technique 64: 164-175 (2004).
- Kreft, M., Stenovec, M. and Zorec, R. Focus-Drift correction in Time-Lapse confocal imaging. Annals of the New York Academy of Sciences 1048: 321-330 (2005).
- Lamprecht, A., Schafer, U. and Lehr, C. M. Structural analysis of microparticles by confocal laser scanning microscopy. AAPS PharmSciTech 49: 10-19 (2000).
- Martinez-Corral, M., Caballero, M. T., Ibanez-Lopez, C. and Sarafis, V. Optical sectioning by two-pinhole confocal fluorescence microscopy. Micron 34: 313-318 (2003).
- McConnell, G. Confocal laser scanning fluorescence microscopy with a visible continuum source. Optics Express 12: 2844-2850 (2004).
- Michalet, X., Lacoste, T. D. and Weiss, S. Ultrahigh-resolution colocalization of spectrally separable point-like fluorescent probes. Methods 25: 87-102 (2001).
- Model, M. A. and Burkhardt, J. K. A standard for calibration and shading correction of a fluorescence microscope. Cytometry 44: 309-316 (2001).
- Nitschke, R., Wilhelm, S., Borlinghaus, R., Leipziger, J., Bindels, R. and Greger, R. A modified confocal laser scanning microscope allows fast ultraviolet ratio imaging of intracellular Ca2+ activity using fura-2. Pflugers Archive European Journal of Physiology 433: 653-663 (1997).
- Rector, D. M., Ranken, D. M. and George, J. S. High-performance confocal system for microscopic or endoscopic applications. Methods 30: 16-27 (2003).
- Shin, H. J., Pierce, M. C., Lee, D., Ra, H., Solgaard, O. and Richards-Kortum, R. Fiber-optic confocal microscope using a MEMS scanner and miniature objective lens. Optics Express15: 9113-9122 (2007).
- Transidico, P., Bianchi, M., Capra, M., Pelicci, P. G. and Faretta, M. From cells to tissues: fluorescence confocal microscopy in the study of histological samples. Microscopy Research and Technique 64: 89-95 (2004).
- Turillazzi, E., Karch, S. B., Neri, M., Pomara, C., Riezzo, I. and Fineschi, V. Confocal laser scanning microscopy. Using new technology to answer old questions in forensic investigations. International Journal of Legal Medicine 122: 173-177 (2007).
- Zucker, R. M. and Lerner, J. M. Confocal microscopy system performance: Foundations for measurements, quantitation and spectroscopy. Microscopy and Microanalysis 10: 1-2 (2004).
- Zucker, R. M. and Price, O. T. Practical confocal microscopy and the evaluation of system performance. Methods 18: 447-458 (1999).
- Zucker, R. M. and Price, O. T. Evaluation of confocal microscopy system performance.Cytometry 44: 273-294 (2001).
- Zucker, R. M. and Price, O. T. Statistical evaluation of confocal microscopy images.Cytometry 44: 295-308 (2001).